Bio::Tools::Run::AnalysisFactory::soap - A SOAP-based access to the list of analysis tools

       The main documentation details are in "Bio::Factory::AnalysisI".

   _initialize
        Usage   : my $factory = Bio::Tools::Run::AnalysisFactory->new(@args);
                  (_initialize is internally called from the 'new()' method)
        Returns : nothing interesting
        Args    : This module recognises and uses following arguments:
                    -location
                    -httpproxy
                    -soap
                  Additionally, the main module Bio::Tools::Run::AnalysisFactory
                  recognises also:
                    -access

       It populates calling object with the given arguments, and then - for some attributes and only if they are
       not yet populated - it assigns some default values.

       This is an actual new() method (except for the real object creation and its blessing which is done in the
       parent class Bio::Root::Root in method _create_object).

       Note  that  this  method  is  called  always as an object method (never as a class method) - and that the
       object who calls this method may already be partly initiated (from  Bio::Tools::Run::AnalysisFactory::new
       method);   so  if  you  need  to  do  some  tricks  with  the  'class  invocation'  you  need  to  change
       Bio::Tools::Run::AnalysisFactory new method, not this one.

       -location
           A URL (also called an endpoint) defining where is located a Web Service functioning for this object.

           Default is "http://www.ebi.ac.uk/soaplab/services" (a  service  running  at  European  Bioinformatics
           Institute on top of most of the EMBOSS analyses, and on top of few others).

           For  example,  if you run your own Web Service using Java(TM) Apache Axis toolkit, the location might
           be something like "http://localhost:8080/axis/services".

       -httpproxy
           In addition to the location parameter, you may need to specify also a location/URL of an  HTTP  proxy
           server (if your site requires one). The expected format is "http://server:port".  There is no default
           value.

       -soap
           Defines  your  own  SOAP::Lite  object.  Useful if you need finer-grained access to many features and
           attributes of the wonderful Paul Kulchenko's module.

   VERSIONandRevision
        Usage   : print $Bio::Tools::Run::AnalysisFactory::soap::VERSION;
                  print $Bio::Tools::Run::AnalysisFactory::soap::Revision;

perl v5.34.0                                       2022-02-10             Bio::Tools::Run...isFactory::soap(3pm)

       Martin Senger (martin.senger@gmail.com)

       None known at the time of writing this.

       Copyright (c) 2003, Martin Senger and EMBL-EBI.  All Rights Reserved.

       This module is free software; you can redistribute it and/or modify it under the same terms as Perl
       itself.

       All public methods are documented in the interface module "Bio::Factory::AnalysisI".

       This software is provided "as is" without warranty of any kind.

MailingLists
       User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments
       and suggestions preferably to the Bioperl mailing list.  Your participation is much appreciated.

         bioperl-l@bioperl.org                  - General discussion
         http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

   Support
       Please direct usage questions or support issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and reponsive experts will be able look
       at the problem and quickly address it. Please include a thorough description of the problem with code and
       data examples if at all possible.

   ReportingBugs
       Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution.
       Bug reports can be submitted via the web:

         http://redmine.open-bio.org/projects/bioperl/

       Bio::Tools::Run::AnalysisFactory::soap - A SOAP-based access to the list of analysis tools

       •   http://www.ebi.ac.uk/soaplab/Perl_Client.html

       Do not use this object directly, it is recommended to access it and use it through the
       Bio::Tools::Run::AnalysisFactory module:

         use Bio::Tools::Run::AnalysisFactory;
         my $list = Bio::Tools::Run::AnalysisFactory->new(-access => 'soap')
            ->available_analyses;
         print join ("\n", @$list) . "\n";