Bio::Tools::Tmhmm - parse TMHMM output (TransMembrane HMM)

       The rest of the documentation details each of the object methods.  Internal methods are usually preceded
       with a _

   new
        Title   : new
        Usage   : my $obj = Bio::Tools::Tmhmm->new();
        Function: Builds a new Bio::Tools::Tmhmm object
        Returns : Bio::Tools::Tmhmm
        Args    : Either of the following as per L<Bio::Root::IO> interface
                    -fh   => $filehandle
                    -file => $filename

   next_result
        Title   : next_result
        Usage   : my $feat = $Tmhmm->next_result
        Function: Get the next result set from parser data
        Returns : Bio::SeqFeature::Generic
        Args    : none

perl v5.32.1                                       2021-08-15                             Bio::Tools::Tmhmm(3pm)

       Email torsten.seemann AT infotech.monash.edu.au

       Email savikalpa@fugu-sg.org

       TMHMM is software for the prediction of transmembrane helices in proteins.  See
       <http://www.cbs.dtu.dk/services/TMHMM/> for more details.

       This module parses the "long output" format of TMHMM 2.0 and creates a Bio:SeqFeature::Generic object for
       each "TMHelix" feature found from lines like this:

         my_sequence_id  TMHMM2.0  TMhelix     54    76

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       Bio::Tools::Tmhmm - parse TMHMM output (TransMembrane HMM)

         use Bio::Tools::Tmhmm;
         my $parser = Bio::Tools::Tmhmm->new(-fh => $filehandle );
         while ( my $tmhmm_feat = $parser->next_result ) {
            # do something, e.g.
            push @tmhmm_feat, $tmhmm_feat;
         }