Bio::Tradis::DetectTags - Detect tr tags in BAM file

Author

       Carla Cummins <path-help@sanger.ac.uk>

Copyright And License

       This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

       This is free software, licensed under:

         The GNU General Public License, Version 3, June 2007

perl v5.38.2                                       2024-01-25                       Bio::Tradis::DetectTags(3pm)

Methods

       "tags_present" - returns true if TraDIS tags are detected in "bamfile"

Name

       Bio::Tradis::DetectTags

Parameters

Required
       "bamfile" - path to/name of file to check

Synopsis

       Detects presence of tr/tq tags in BAM files from Tradis analyses
          use Bio::Tradis::DetectTags;

          my $pipeline = Bio::Tradis::DetectTags->new(bamfile => 'abc');
          $pipeline->tags_present();