GO::Parsers::go_xref_parser - syntax parsing of GO xref flat files (eg eg2go, metacyc2go)
Contents
Description
This generates Stag event streams from one of the various GO flat file formats (ontology, defs, xref,
associations). See GO::Parser for details
Examples of these files can be found at http://www.geneontology.org
A description of the event streams generated follows; Stag or an XML handler can be used to catch these
events
Go Xref Files
These files have a filename *2go; eg metacyc2go
(dbxrefs
(termdbxref+
(termacc "s")
(dbxref
(xref_dbname "s")
(xref_key "s"))))
Name
GO::Parsers::go_xref_parser - syntax parsing of GO xref flat files (eg eg2go, metacyc2go)
Synopsis
do not use this class directly; use GO::Parser
