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Bio::DB::GFF::Homol -- A segment of DNA that is homologous to another

Author

       Lincoln Stein <lstein@cshl.org>.

       Copyright (c) 2001 Cold Spring Harbor Laboratory.

       This library is free software; you can redistribute it and/or modify it under the same terms as Perl
       itself.

perl v5.30.0                                       2020-01-13                           Bio::DB::GFF::Homol(3pm)

Bugs

       This module is still under development.

Description

       Bio::DB::GFF::Homol is a named subtype of Bio::DB::GFF::Segment.  It inherits all the methods of its
       parent, and was created primarily to allow for isa() queries and for compatibility with
       Ace::Sequence::Homol.

       A Homol object is typically returned as the method result of the Bio::DB::GFF::Feature->target() method.

Methods

name
        Title   : name
        Usage   : $name = $homol->name
        Function: get the ID of the homology object
        Returns : a string
        Args    : none
        Status  : Public

   asString
        Title   : asString
        Usage   : $name = $homol->asString
        Function: same as name(), for operator overloading
        Returns : a string
        Args    : none
        Status  : Public

   id
        Title   : id
        Usage   : $id = $homol->id
        Function: get database ID in class:id format
        Returns : a string
        Args    : none
        Status  : Public

Name

       Bio::DB::GFF::Homol -- A segment of DNA that is homologous to another

See Also

       bioperl, Bio::DB::GFF, Bio::DB::RelSegment

Synopsis

       See Bio::DB::GFF.

See Also