Bio::Roary::AnnotateGroups - Take in a group file and associated GFF files for the isolates and update

Author

       Andrew J. Page <ap13@sanger.ac.uk>

Copyright And License

       This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

       This is free software, licensed under:

         The GNU General Public License, Version 3, June 2007

perl v5.40.0                                       2024-12-02                    Bio::Roary::AnnotateGroups(3pm)

Name

       Bio::Roary::AnnotateGroups - Take in a group file and associated GFF files for the isolates and update
       the group name to the gene name

Synopsis

       Take in a group file and associated GFF files for the isolates and update the group name to the gene name
          use Bio::Roary::AnnotateGroups;

          my $obj = Bio::Roary::AnnotateGroups->new(
            gff_files   => ['abc.gff','efg.gff'],
            output_filename   => 'example_output.fa',
            groups_filename => 'groupsfile',
          );
          $obj->reannotate;