Bio::Roary::External::Mcl - Wrapper around MCL which takes in blast results and outputs clustered results

       Andrew J. Page <ap13@sanger.ac.uk>

       This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

       This is free software, licensed under:

         The GNU General Public License, Version 3, June 2007

perl v5.40.0                                       2024-12-02                     Bio::Roary::External::Mcl(3pm)

       Bio::Roary::External::Mcl - Wrapper around MCL which takes in blast results and outputs clustered results

       Wrapper around MCL which takes in blast results and outputs clustered results

          use Bio::Roary::External::Mcl;

          my $mcl= Bio::Roary::External::Mcl->new(
            blast_results     => 'db',
            mcxdeblast_exec   => 'mcxdeblast',
            mcl_exec          => 'mcl',
            output_file       => 'output.groups'
          );

          $mcl->run();

       version 3.13.0