Blast-Radius Aware AI Code Review for Business-Critical Systems
LiveReview LiveReview Explore LiveReview

Bio::Roary::FilterFullClusters - Take an a clusters file from CD-hit and the fasta file and output a

Author

       Andrew J. Page <ap13@sanger.ac.uk>

Name

       Bio::Roary::FilterFullClusters - Take an a clusters file from CD-hit and the fasta file and output a
       fasta file without full clusters

Synopsis

       Take an a clusters file from CD-hit and the fasta file and output a fasta file without full clusters
          use Bio::Roary::FilterFullClusters;

          my $obj = Bio::Roary::FilterFullClusters->new(
              clusters_filename        => $cluster_file,
              fasta_file           => $fasta_file,
              number_of_input_files => 10,
              output_file => 'filtered_file'
            );
          $obj->filter_full_clusters_from_fasta();

Version

       version 3.13.0

See Also