SWISS::GeneGroup.pm
Contents
Attributes
"Names"
Each list element is a SWISS::GN object, describing a primary name
or synonym. Concatenation of Name and Synonyms lists.
"OLN"
Each list element is a SWISS::GN object, describing an
OrderedLocusName.
"ORFNames"
Each list element is a SWISS::GN object, describing an ORFName.
Description
A SWISS::GeneGroup object contain all synonyms for a given gene name. See SWISS::GNs for a description of
the gene name format.
Inherits From
SWISS::BaseClass.pm
(also implements many methods from SWISS::ListBase.pm)
Methods
Standardmethods
new
fromText
toText
Specificmethods
Name
Returns the Name (primary name).
Synonyms
Returns the Synonyms.
elements
Concatenates all elements from Names, OLN and ORFNames in
a single array.
Listmanipulationmethods
Since GeneGroup was a previous implementation of SWISS::ListBase, the list manipulation methods below are
provided to facilitate compatibility.
size
isEmpty
elements
filter
get (deprecated)
head (deprecated)
tail (deprecated)
item (deprecated)
push (deprecated)
pop (deprecated)
shift (deprecated)
splice (deprecated)
unshift (deprecated)
set (deprecated)
add (deprecated)
perl v5.32.1 2021-08-15 SWISS::GeneGroup(3pm)
Name
SWISS::GeneGroup.pm
