visir_util_clip - Kappa-sigma clipping of outliers for each pixel

       Lars Lundin <https://support.eso.org>

       Please report any problems to https://support.eso.org. Alternatively, you may send a report  to  the  ESO
       User Support Department <usd-help@eso.org>.

       The  files  listed  in  the  Set  Of  Frames (sof-file) must be tagged pair-wise: VISIR-raw-file.fits RAW
       VISIR-bpm-file.fits BPM

       The product(s) will have a FITS card ´HIERARCH ESO PRO CATG´ with a value of: BPM The outliers are marked
       as rejected in the matching bad pixel map.

       This file is part of the VISIR Instrument Pipeline Copyright (C) 2011 European Southern Observatory

       This  program  is  free  software;  you  can  redistribute it and/or modify it under the terms of the GNU
       General Public License as published by the Free Software Foundation; either version 2 of the License,  or
       (at your option) any later version.

       This  program  is  distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even
       the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General  Public
       License for more details.

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       to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02111-1307  USA

visir_util_clip                                       4.4.2                                   VISIR_UTIL_CLIP(7)

       visir_util_clip - Kappa-sigma clipping of outliers for each pixel

--keepfrac<float>
              The fraction of pixels to keep for the initialmedian (float; default: 0.9). The full name of  this
              option for the EsoRex configuration file is visir.visir_util_clip.keepfrac [default = 0.9].

       --kappa<float>
              Clip outside + or - kappa * sigma (the standard deviation) (float; default: 5.0). The full name of
              this option for the EsoRex configuration file is visir.visir_util_clip.kappa [default = 5.0].

       --maxite<int>
              Max  number of kappa-sigma clipping iterations (int; default: 3). The full name of this option for
              the EsoRex configuration file is visir.visir_util_clip.maxite [default = 3].

       --shift-beams<bool>
              Account for movements of the object defined in CRPIX[12] (bool; default: True). The full  name  of
              this  option  for  the  EsoRex  configuration file is visir.visir_util_clip.shift-beams [default =
              True].

       --error-source<str>
              Defines the way errors are generated:  img-stdev: stdev of image timeseries: stdev of  each  pixel
              over  the  time  axis of the cube  none: no error generation (str; default: ´img-stdev´). The full
              name of this option  for  the  EsoRex  configuration  file  is  visir.visir_util_clip.error-source
              [default = img-stdev].

       --error-out-type<str>
              Output  clipped error as error, variance, weight or none (str; default: ´error´). The full name of
              this option for the EsoRex configuration file is visir.visir_util_clip.error-out-type  [default  =
              error].

       --badimage<float>
              If  percentage  of  clipped  pixels  above  this  value  the whole image is considered bad (float;
              default:  0.2).  The  full  name  of  this  option  for   the   EsoRex   configuration   file   is
              visir.visir_util_clip.badimage [default = 0.2].

       Note  that  it  is  possible to create a configuration file containing these options, along with suitable
       default values. Please refer to the details provided by the 'esorex --help' command.

       The full documentation for the visir pipeline can be downloaded as a PDF file using the following URL:

              ftp://ftp.eso.org/pub/dfs/pipelines/visir/visir-pipeline-manual-1.4.pdf

       An   overview   over   the   existing   ESO   pipelines    can    be    found    on    the    web    page
       https://www.eso.org/sci/software/pipelines/.

       Basic documentation about the EsoRex program can be found at the esorex (1) man page.

       It   is   possible   to   call   the   pipelines   from   python   using  the  python-cpl  package.   See
       https://packages.python.org/python-cpl/index.html for further information.

       The other recipes of the visir  pipeline  are  visir_img_dark(7),  visir_img_ff(7),  visir_img_reduce(7),
       visir_img_trans(7),      visir_old_img_combine(7),      visir_old_img_phot(7),      visir_old_spc_obs(7),
       visir_old_spc_obs_ech(7),   visir_old_spc_phot(7),   visir_old_spc_phot_ech(7),    visir_old_spc_wcal(7),
       visir_old_spc_wcal_ech(7),  visir_old_util_destripe(7),  visir_spc_reduce(7),  visir_util_apply_calib(7),
       visir_util_convert_weight(7), visir_util_detect_shift(7), visir_util_img_std_cat(7),  visir_util_join(7),
       visir_util_qc(7),      visir_util_repack(7),      visir_util_run_swarp(7),     visir_util_spc_std_cat(7),
       visir_util_spc_txt2fits(7), visir_util_undistort(7)

       esorex visir_util_clip [OPTIONS] FILE.sof

       visir_util_clip 4.4.2