Aevol - an in silico experimental evolution platform
Contents
Description
Aevol is a simulation platform that allows one to let populations of digital organisms evolve in
different conditions and study experimentally the mechanisms responsible for the structuration of the
genome and the transcriptome.
aevol_misc_extract
extracts the genotype and/or data about the phenotype of individuals in the provided population
and write them into text files easy to parse with e.g. matlab.
Name
Aevol - an in silico experimental evolution platform
Options
-h,--help
print help, then exit
-V,--version
print version number, then exit
-tTIMESTEP
specify timestep of the individual(s) of interest
-SSEQ_FILE
extract sequences into file SEQ_FILE
-TTRIANGLE_FILE
extract phenotypic data into file TRIANGLE_FILE
-UNUM_GU
only treat genetic unit #NUM_GU
default: treat all genetic units
-a
treat all the individuals
default: treat only the best
See Also
ae_misc_lineage,aevol_create,aevol_modify,aevol_propagate,aevol_run
aevol 5.0 July 2016 AEVOL(1)
Synopsis
aevol_misc_extract-h | --helpaevol_misc_extract-V | --versionaevol_misc_extract [-tTIMESTEP] [-SSEQ_FILE] [-TTRIANGLE_FILE] [-UNUM_GU] [-a]
