chromostitch.pl - Makes stitch files for feeding to geneparse.pl to allow feeding of multiple chromosomes
Contents
Description
Makes stitch files for feeding to geneparse.pl to allow feeding of multiple chromosomes to programs like
murasaki
perl v5.40.0 2024-11-30 CHROMOSTITCH(1)
Name
chromostitch.pl - Makes stitch files for feeding to geneparse.pl to allow feeding of multiple chromosomes
to programs like murasaki
Parameters
stitchfile output file (overwrites)
chromosome1chromosome2... List of chromosome input files
B--output=<file> Alternate way of specifying an output file
B--sort Always sort EVERYTHING. (Allows for nicely sorted lists from sloppy input of filenames from like
multiple directories of *.gbk or something)
Synopsis
chromostitch.pl [options] <stitch file> <chromosome1 chromosome2 ... >
Options:
--sort sorts everything
--output=<file> altnerate way of specifying an output file
