gmod_make_cvtermpath.pl - calculates the transitive closure on the ontology terms in the cvterm table

       Naama Menda <nm249@cornell.edu>

       This script calculates the transitive closure on the ontology terms in the cvterm table.  As  this  is  a
       computationaly intensive operation, doing so on a large cv like the Gene Ontology can take several hours.
       For more information on what a transative closure is, please see:

         http://www.geneontology.org/GO.database.shtml#graphs

       gmod_make_cvtermpath.pl - calculates the transitive closure on the ontology terms in the cvterm table

        perl gmod_make_cvtermpath.pl -H [dbhost] -D [dbname]  [-vt] -c cvname
        perl gmod_make_cvtermpath.pl -g [GMODConf_profile] -c cvname

   Parameters
       -c   Name of ontology (cv.name) to compute the transitive closure on. (Required)

       -v   Verbose output

       -t   Trial mode. Do not perform any store operations at all. (Not implemented)

       -o   outfile for writing errors and verbose messages (optional)

       -g   GMOD database profile name (can provide host and DB name) Default: 'default'

   IfnotusingaGMODdatabaseprofile(option-g)thenyoumustprovidethefollowingparameters
       -D   Database name

       -H   Hostname

       -d   Database driver name (e.g. 'Pg' for postgres)

       -u   [Optional- if default user is not used] Database user name

       -p   [Optional-  if you need a password to connect to your database] Password for your user to connect to
            the database

       Version 1.2, Feb. 2011.

perl v5.30.0                                       2019-12-05                           GMOD_MAKE_CVTERMPATH(1p)