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godef - Find GO ontology terms by definition

Author

DebianMedPackagingTeam <debian-med-packaging@lists.alioth.debian.org>
           Wrote the script used to autogenerate this manual page.

Bugs

       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
       the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

Description

godef is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is
       part of the "Ontology:GO,Data retrieval:Ontology data" command group(s).

Name

       godef - Find GO ontology terms by definition

Options

Inputsection-querystringAdditionalsection-namespacelist
           By default all terms are returned. Searches can be limited to one or a few namespaces. Default value:
           *

   Advancedsection-subclassesboolean
           Extend the query matches to include all terms which are specialisations (GO sub-classes) of the
           matched type. Default value: N

       -obsoleteboolean
           The default behaviour is to not use or return obsolete terms. This option if set will include all
           terms. Default value: N

   Outputsection-godefoutobo

See Also

       godef is fully documented via the tfm(1) system.

Synopsis

godef-querystring [-namespacelist] -subclassesboolean-obsoleteboolean-godefoutobogodef-help

See Also