gt-ltrclustering - Cluster features of LTRs.

-psmall [value]
           specify how many percent of the smaller sequence a match needs to cover in order to cluster the two
           sequences of the match. (default: 0)

       -plarge [value]
           specify how many percent of the larger sequence a match needs to cover in order to cluster the two
           sequences of the match. (default: 0)

       -o [filename]
           redirect output to specified file (default: undefined)

       -gzip [yes|no]
           write gzip compressed output file (default: no)

       -bzip2 [yes|no]
           write bzip2 compressed output file (default: no)

       -force [yes|no]
           force writing to output file (default: no)

       -help
           display help and exit

       -version
           display version information and exit

       gt-ltrclustering - Cluster features of LTRs.

       Report bugs to https://github.com/genometools/genometools/issues.

GenomeTools 1.6.5                                  04/27/2024                                GT-LTRCLUSTERING(1)

gtltrclustering [option ...] indexname [GFF3_file ...]