normalize-iHS

       Erik Garrison and vcflib contributors.

normalize-iHS (vcflib)                                                                          NORMALIZE-IHS(1)

       normalizes iHS or XP-EHH scores.

0      Success

       not0  Failure

       Copyright  2011-2024  (C)  Erik Garrison and vcflib contributors.  MIT licensed.  Copyright 2020-2024 (C)
       Pjotr Prins.

normalize-iHS

              A cross-population extended haplotype homozygosity (XP-EHH) score is
              directional: a positive score suggests selection is likely to have
              happened in population A, whereas a negative score suggests the same
              about population B. See for example
              https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2687721/

              Output : **normalize-iHS** adds one additional column to input (normalized score).
              required: -f            -- Output from iHS or XPEHH
              optional: -s            -- Max AF diff for window [0.01]

              Type: genotype

vcflib(1)

       normalizeHS -s 0.01 -f input.txt