simkaMerge - comparative metagenomics method dedicated to NGS datasets

       This manpage was written by Shayan Doust for the Debian distribution and can be used for any other  usage
       of the program.

simkaMerge 1.5.1                                 September 2019                                    SIMKAMERGE(1)

       ERROR:  Unknown  parameter  '-h'  ERROR:  Option  '-nb-cores'  is mandatory ERROR: Option '-kmer-size' is
       mandatory ERROR: Option '-in' is mandatory ERROR: Option  '-out-tmp-simka'  is  mandatory  ERROR:  Option
       '-partition-id'  is  mandatory  ERROR:  Option  '-nb-cores'  is  mandatory ERROR: Option '-max-memory' is
       mandatory ERROR: Option '-kmer-shannon-index' is mandatory

       [SimkaMerge options]

       -nb-cores
              (1 arg) :    number of cores  [default '0']

       -verbose
              (1 arg) :    verbosity level  [default '1']

       -version
              (0 arg) :    version

       -help  (0 arg) :    help

       -nb-cores
              (1 arg) :    nb cores

       -kmer-size
              (1 arg) :    kmer size

       -in    (1 arg) :    input filename

       -out-tmp-simka
              (1 arg) :    tmp output

       -partition-id
              (1 arg) :    bank name

       -nb-cores
              (1 arg) :    bank name

       -max-memory
              (1 arg) :    bank name

       -kmer-shannon-index (1 arg) :
              bank name

       -simple-dist
              (0 arg) :    compute simple distances

       -complex-dist
              (0 arg) :    compute complex distances

       simkaMerge - comparative metagenomics method dedicated to NGS datasets