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spliced_bam2gff - Collection of tools to annotate genomes using long read transcriptomics data

Author

        This manpage was written by Nilesh Patra for the Debian distribution and
        can be used for any other usage of the program.

spliced_bam2gff 0.1.0+ds                         September 2020                               SPLICED_BAM2GFF(1)

Description

Usageofspliced_bam2gff:-M     Input is from minimap2.

       -V     Print out version.

       -g     Use strand tag as feature orientation then read strand if not available.

       -h     Print out help message.

       -s     Use read strand (from BAM flag) as feature orientation.

       -t int

              Number of cores to use. (default 4)

Name

       spliced_bam2gff - Collection of tools to annotate genomes using long read transcriptomics data

See Also