syco - Draw synonymous codon usage statistic plot for a nucleotide sequence
Contents
Bugs
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).
Copyright
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be
redistributed under the same terms as EMBOSS itself.
EMBOSS 6.4.0 05/11/2012 SYCO(1e)
Description
syco is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is
part of the "Nucleic:Codon usage,Nucleic:Gene finding" command group(s).
Name
syco - Draw synonymous codon usage statistic plot for a nucleotide sequence
Options
Inputsection-sequencesequence-cfilecodon
Codon usage file
Advancedsection-windowinteger
Default value: 30
-uncommonboolean
Default value: N
-minimumfloat
Default value: .15
Outputsection-plottoggle
Default value: Y
-graphxygraph-outfileoutfileSee Also
syco is fully documented via the tfm(1) system.
Synopsis
syco-sequencesequence-cfilecodon-windowinteger-uncommonboolean-minimumfloat-plottoggle-graphxygraph-outfileoutfilesyco-help
