logo
Free, unlimited AI code reviews that run on commit
git-lrc git-lrc GitHub Install Now We'd appreciate a star git-lrc - Free, unlimited AI code reviews that run on commit | Product Hunt git-lrc - Free, unlimited AI code reviews that run on commit | Product Hunt

tigr-glimmer - runs various programs of the TIGR Glimmer suite

Authors

       This  manual  page  was written by Andreas Tille <tille@debian.org>, for the Debian GNU/Linux system (but
       may be used by others).

                                                 April 16, 2008                                  TIGR-GLIMMER(1)

Description

       This  manual  page  documents briefly the tigr-glimmer wrapper to the TIGR Glimmer programs.  This manual
       page was written for the Debian GNU/Linux distribution because upstream does not provide this wrapper and
       it was invented for Debian to avoid  conflicts  with  other  packages  that  might  cause  a  name  space
       pollution.

       tigr-glimmer  is  just  a wrapper that invokes the various programs in the TIGR Glimmer software package.
       You  can  get  more  detailed  documentation  in  /usr/share/doc/tigr-glimmer.   Please  note  that   the
       documentation  there  is a part of the former version Glimmer 2.  The version Glimmer 3 has some features
       that were described in the notes.pdf document inside the documentation directory.

       The following programs are included: anomaly,  build-fixed,  build-icm,  entropy-profile,  entropy-score,
       extract,  glimmer3,  long-orfs,  multi-extract,  score-fixed,  start-codon-distrib,  test,  uncovered and
       window-acgt.

Examples

       tigr-glimmer build-icm

       tigr-glimmer long-orfs

Name

       tigr-glimmer - runs various programs of the TIGR Glimmer suite

Options

       There are no options.

See Also

       For the pre previously packaged version Glimmer2 some text files from the documentation  were  turned  to
       man pages for the Debian GNU/Linux distribution by Steffen Moeller <moeller@debian.org>

Synopsis

tigr-glimmerprogram [arguments]

See Also