vcfcombine

Authors

       Erik Garrison and vcflib contributors.

vcfcombine (vcflib)                                                                                VCFCOMBINE(1)

Description

       Combine  VCF  files  positionally, combining samples when sites and alleles are identical.  Any number of
       VCF files may be combined.  The INFO field and other columns are taken from one of the  files  which  are
       combined  when records in multiple files match.  Alleles must have identical ordering to be combined into
       one record.  If they do not, multiple records will be emitted.

Exit Values

0      Success

       not0  Failure

License

       Copyright 2011-2024 (C) Erik Garrison and vcflib contributors.  MIT licensed.   Copyright  2020-2024  (C)
       Pjotr Prins.

Name

vcfcombine

Options

              options:
                  -h --help           This text.
                  -v --version        Print version.
                  -r --region REGION  A region specifier of the form chrN:x-y to bound the merge

              Type: transformation