vcfsamplediff

       Erik Garrison and vcflib contributors.

vcfsamplediff (vcflib)                                                                          VCFSAMPLEDIFF(1)

       Establish  putative  somatic  variants  using  reported differences between germline and somatic samples.
       Tags each record where the listed sample genotypes differ with .  The  first  sample  is  assumed  to  be
       germline,  the second somatic.  Each record is tagged with ={germline,somatic,loh} to specify the type of
       variant given the genotype difference between the two samples.

0      Success

       not0  Failure

       Copyright 2011-2024 (C) Erik Garrison and vcflib contributors.  MIT licensed.   Copyright  2020-2024  (C)
       Pjotr Prins.

vcfsamplediff

              options:
                  -s --strict     Require that no observations in the germline support the somatic alternate.

              Type: transformation

vcflib(1)

vcfsamplediff options [ ...  ]