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remove_short_seqs - visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences

Author

       This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage
       of the program.

remove_short_seqs 20170919                         August 2018                              REMOVE_SHORT_SEQS(1)

Description

       usage:  remove_short_seqs  [[-i  input]  [-l  length] | [-h]] -i DIRECTORY the input directory of GenBank
       files with .gbk extensions -l INTEGER remove GenBank files that  describe  sequences  shorter  than  this
       length

   USAGE:
              remove_short_seqs -i DIR -l INTEGER

   DESCRIPTION:
              Removes GenBank files that are shorter than the specified length from the provided directory.

   REQUIREDARGUMENTS:-i, --input DIR

              Input directory of GenBank files with .gbk extensions.

       -l, --length INTEGER

              Remove GenBank files that describe sequences shorter than this length.

   OPTIONALARGUMENTS:-h, --help

              Show this message

   EXAMPLE:
              remove_short_seqs -i my_project/comparison_genomes -l 100000

Name

       remove_short_seqs - visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences

See Also