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vcfremoveaberrantgenotypes

Contents

Authors

       Erik Garrison and vcflib contributors.

vcfremoveaberrantgenotypes (vcflib)                                                VCFREMOVEABERRANTGENOTYPES(1)

Description

       strips  samples  which  are homozygous but have observations implying heterozygosity.  Remove samples for
       which the reported genotype (GT) and observation counts disagree (AO, RO).

Exit Values

0      Success

       not0  Failure

License

       Copyright 2011-2024 (C) Erik Garrison and vcflib contributors.  MIT licensed.   Copyright  2020-2024  (C)
       Pjotr Prins.

Name

vcfremoveaberrantgenotypes

Options

              Type: transformation

Other

See Also
vcflib(1)


Synopsis
vcfremoveaberrantgenotypes
See Also
Man Pages
vcflib index  Man Pages
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which  Man Pages
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glab  Man Pages
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t.sample  Man Pages
Copyright
Copyright  PNG Icons
Installerpedia
magic-research/magic-animate  Installerpedia
MCP
Mcp-interact  Mcp
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