abiview - Display the trace in an ABI sequencer file
Contents
Bugs
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).
Copyright
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be
redistributed under the same terms as EMBOSS itself.
EMBOSS 6.4.0 05/11/2012 ABIVIEW(1e)
Description
abiview is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It
is part of the "Data retrieval:Sequence data,Display" command group(s).
Name
abiview - Display the trace in an ABI sequencer file
Options
Inputsection-infileinfileOutputsection-outseqseqout-graphxygraph-startbaseinteger-endbaseinteger
Last sequence base to report or display. If the default is set to zero then the value of this is
taken as the maximum number of bases.
-separateboolean
Default value: N
-yticksboolean
Default value: N
-sequenceboolean
Default value: Y
-windowinteger
Default value: 40
-basesstring
Default value: GATC
See Also
abiview is fully documented via the tfm(1) system.
Synopsis
abiview-infileinfile-outseqseqout-graphxygraph [-startbaseinteger] [-endbaseinteger]
-separateboolean [-yticksboolean] [-sequenceboolean] [-windowinteger] [-basesstring]
abiview-help