logo
Free, unlimited AI code reviews that run on commit
git-lrc git-lrc GitHub Install Now We'd appreciate a star git-lrc - Free, unlimited AI code reviews that run on commit | Product Hunt git-lrc - Free, unlimited AI code reviews that run on commit | Product Hunt

Aevol - an in silico experimental evolution platform

Description

Aevol  is  a  simulation  platform  that  allows  one  to  let populations of digital organisms evolve in
       different conditions and study experimentally the mechanisms responsible for  the  structuration  of  the
       genome and the transcriptome.

       aevol_misc_lineage
              reconstruct the lineage of a given individual from the tree files

Name

       Aevol - an in silico experimental evolution platform

Options

-h,--help
              print help, then exit

       -V,--version
              print version number, then exit

       -b,--beginTIMESTEP
              specify time t0 up to which to reconstruct the lineage

       -e,--endTIMESTEP
              specify time t_end of the indiv whose lineage is to be reconstructed

       -I,--indexINDEX
              specify the index of the indiv whose lineage is to be reconstructed

       -R,--rankRANK
              specify the rank of the indiv whose lineage is to be reconstructed default: best individual

       -F,--full-check
              perform genome checks whenever possible

       -v,--verbose
              be verbose

See Also

aevol_create,aevol_modify,aevol_propagate,aevol_run

aevol 5.0                                           July 2016                                           AEVOL(1)

Synopsis

aevol_misc_lineage-h | --helpaevol_misc_lineage-V | --versionaevol_misc_lineage [-bTIMESTEP] [-eTIMESTEP] [-IINDEX | -RRANK] [-F] [-v]

See Also