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asn2idx - index ASN.1 Bioseq-sets for fast access to individual sequences

Author

       The National Center for Biotechnology Information.

Description

asn2idx  indexes  ASN.1  Bioseq-sets (such as GenBank release files) to speed retrieval of the individual
       sequences they contain.  For each file that it processes, it yields an output file in the same  directory
       with the extension .idx.

Name

       asn2idx - index ASN.1 Bioseq-sets for fast access to individual sequences

Options

       A summary of options is included below.

       -      Print usage message

       -b     Bioseq-sets are Binary

       -ddir Required Subdirectory

       -ffilter
              Filter (default = gbcon,gbest,gbgss,gbhtg,gbsts)

       -ppath
              Path to Files

       -ppath
              Path for Results

       -t     Recurse

       -xstr File Selection Substring (default = .aso)

See Also

asn2asn(1), asndhuff(1).

NCBI                                               2008-12-13                                         ASN2IDX(1)

Synopsis

asn2idx [-] [-b] [-ddir] [-ffilter] -ppath [-rpath] [-t] [-xstr]

See Also