logo
Free, unlimited AI code reviews that run on commit
git-lrc git-lrc GitHub Install Now We'd appreciate a star git-lrc - Free, unlimited AI code reviews that run on commit | Product Hunt git-lrc - Free, unlimited AI code reviews that run on commit | Product Hunt

assembly-stats - get assembly statistics from FASTA and FASTQ files

Author

        This manpage was written by Andreas Tille for the Debian distribution and
        can be used for any other usage of the program.

assembly-stats 1.0.1+ds                             June 2020                                  ASSEMBLY-STATS(1)

Description

       Reports sequence length statistics from fasta and/or fastq files

Name

       assembly-stats - get assembly statistics from FASTA and FASTQ files

Options

-l <int>

              Minimum length cutoff for each sequence.  Sequences shorter than the cutoff will be ignored [1]

       -s

              Print 'grep friendly' output

       -t

              Print tab-delimited output

       -u

              Print tab-delimited output with no header line

       -v

              Print version and exit

Synopsis

stats [options] <list of fasta/q files>

See Also