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average_affine - Average affine transformations

Acknowledgments

       CMTK  is  developed  with support from the NIAAA under Grant AA021697, National Consortium on Alcohol and
       Neurodevelopment in Adolescence (N-CANDA): Data Integration Component. From April 2009 through  September
       2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.

CMTK 3.3.1p2                                       Feb 26 2025                                 average_affine(1)

Authors

       Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R.  Maurer,  Daniel  B.
       Russakoff, and Yaroslav Halchenko

Bugs

Description

       This tool computes the average of a sequence of user-provided affine coordinate transformations.

License

Name

       average_affine - Average affine transformations

Options

GlobalToolkitOptions(thesearesharedbyallCMTKtools)--help
            Write list of basic command line options to standard output.

       --help-all
            Write complete list of basic and advanced command line options to standard output.

       --wiki
            Write list of command line options to standard output in MediaWiki markup.

       --man
            Write man page source in 'nroff' markup to standard output.

       --version
            Write toolkit version to standard output.

       --echo
            Write the current command line to standard output.

       --verbose-level<integer>
            Set verbosity level.

       --verbose, -v
            Increment verbosity level by 1 (deprecated; supported for backward compatibility).

       --threads<integer>
            Set maximum number of parallel threads (for POSIX threads and OpenMP).

   MainOptions--include-reference, -r
            Include reference coordinate system in averaging.

       --outfile<string>, -o<string>
            Output transformation.  [Default:average.xform]--append, -a
            Append to output file [default: overwrite].

       --invert-output, -I
            Invert averaged transformation before output [default: no].

Synopsis

       average_affine [options] x0 [x1 ...]
        WHERE  x0  ...  xN  is  [{-i,--inverse}]  affine  transformation  #. (If the first transformation in the
       sequence is inverted, then '--inverse' must be preceded by '--', i.e., use '-- --inverse xform.path').

See Also