bowtie-align-s - ultrafast memory-efficient short read aligner

       usage: bowtie [-h] [--verbose] [--debug] [--large-index]

   options:-h, --help
              show this help message and exit

       --verbose--debug--large-index

       64-bit Built on Debian-reproducible Thu, 25 Jan 2024 12:27:31 +0100 Compiler: gcc version 13.2.0 Options:
       -O3-Wl,--hash-style=both     -DPOPCNT_CAPABILITY-Wdate-time-D_FORTIFY_SOURCE=3-g-O2-fno-omit-frame-pointer-mno-omit-leaf-frame-pointer-ffile-prefix-map=.=.  -flto=auto-ffat-lto-objects-fstack-protector-strong-fstack-clash-protection-Wformat-Werror=format-security-fcf-protection-fdebug-prefix-map=.=/usr/src/bowtie-1.3.1-3  -g-O2-fno-omit-frame-pointer-mno-omit-leaf-frame-pointer-ffile-prefix-map=.=.  -flto=auto-ffat-lto-objects-fstack-protector-strong-fstack-clash-protection-Wformat-Werror=format-security-fcf-protection-fdebug-prefix-map=.=/usr/src/bowtie-1.3.1-3 -std=c++03
       -Wl,-Bsymbolic-functions -flto=auto-ffat-lto-objects-Wl,-z,relro -Wl,-z,now  Sizeof  {int,  long,  long
       long, void*, size_t, off_t}: {4, 8, 8, 8, 8, 8}

bowtie-align-s version 1.3.1                      January 2024                                 BOWTIE-ALIGN-S(1)

       bowtie-align-s - ultrafast memory-efficient short read aligner