bp_meta_gff.pl - Get/set Bio::DB::GFF meta-data
Contents
Command-Line Options
Command-line options can be abbreviated to single-letter options. e.g. -d instead of --database.
--database <dsn> Mysql database name (default dbi:mysql:test)
--adaptor <adaptor> Mysql adaptor (default dbi::mysqlopt)
--user <user> Username for mysql authentication
--pass <password> Password for mysql authentication
Description
This script gets or sets metadata in a Bio::DB::GFF database. Not all adaptors support this operation!
To set a series of tags, pass a set of tag=value pairs to the script. To get the contents of a series of
tags, pass the bare tag names.
The output from the get operation will be an easily parseable set of tag=value pairs, one per line.
Name
bp_meta_gff.pl - Get/set Bio::DB::GFF meta-data
See Also
Bio::DB::GFF
Synopsis
# set the following meta data values
% bp_meta_gff.pl -d testdb tag1=value1 tag2=value2
# get the indicated meta data value
% bp_meta_gff.pl -d testdb tag1 tag2
