cirdna - Draws circular maps of DNA constructs
Contents
Bugs
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).
Copyright
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be
redistributed under the same terms as EMBOSS itself.
EMBOSS 6.4.0 05/11/2012 CIRDNA(1e)
Description
cirdna is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It
is part of the "Display" command group(s).
Name
cirdna - Draws circular maps of DNA constructs
Options
Inputsection-infileinfile
Default value: inputfile
Additionalsection-maxgroupsinteger
Default value: 20
-maxlabelsinteger
Default value: 10000
Outputsection-rulerboolean
Default value: Y
-blocktypelist
Default value: Filled
-originanglefloat
Default value: 90
-posticksselection
Default value: Out
-posblocksselection
Default value: In
-intersymbolboolean
Default value: Y
-intercolourinteger
Default value: 1
-interticksboolean
Default value: N
-gapsizeinteger
Default value: 500
-ticklinesboolean
Default value: N
-textheightfloat
Height of text. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default
value: 1.0
-textlengthfloat
Length of text. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default
value: 1.0
-tickheightfloat
Height of ticks. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default
value: 1.0
-blockheightfloat
Height of blocks. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default
value: 1.0
-rangeheightfloat
Height of range ends. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively
Default value: 1.0
-gapgroupfloat
Space between groups. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively
Default value: 1.0
-postextfloat
Space between text and ticks, blocks, and ranges. Enter a number <1.0 or >1.0 to decrease or increase
the size, respectively Default value: 1.0
-graphoutgraphSee Also
cirdna is fully documented via the tfm(1) system.
Synopsis
cirdna-infileinfile [-maxgroupsinteger] [-maxlabelsinteger] -rulerboolean-blocktypelist
[-originanglefloat] -posticksselection-posblocksselection [-intersymbolboolean]
[-intercolourinteger] [-interticksboolean] [-gapsizeinteger] [-ticklinesboolean]
[-textheightfloat] [-textlengthfloat] [-tickheightfloat] [-blockheightfloat]
[-rangeheightfloat] [-gapgroupfloat] [-postextfloat] -graphoutgraphcirdna-help