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convert_vcf_to_features - visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences

Author

       This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage
       of the program.

convert_vcf_to_features 20170919                   August 2018                        CONVERT_VCF_TO_FEATURES(1)

Description

       Unknown option: help 1

   USAGE:
              convert_vcf_to_features -i INFILE -o OUTFILE

   DESCRIPTION:
              This script converts a VCF (Variant Call Format) file into a feature file (GFF). The resulting GFF
              file  can  be  used  by  the  CGview Comparison tool.  Simply place the GFF file in the 'features'
              directory of a CCT project.

   REQUIREDARGUMENTS:-i, --input FILE

              Input VCF file (tab deliminated).

       -o, --output FILE

              Name to call the output file.

   EXAMPLE:
              convert_vcf_to_features -i input.vcf -o output.gff

Name

       convert_vcf_to_features - visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences

See Also