usage: ConvertHeaders.py [--version] [-h] ...
Converts sequence headers to the pRESTO format
help:--version
show program's version number and exit
-h, --help
show this help message and exit
subcommands:
Conversion method
generic
Converts sequence headers without a known annotation system.
454 Converts Roche 454 sequence headers.
genbank
Converts NCBI GenBank and RefSeq sequence headers.
illumina
Converts Illumina sequence headers.
imgt Converts sequence headers output by IMGT/GENE-DB.
migec Converts headers for consensus sequence generated by the MIGEC tool.
sra Converts NCBI SRA or EMBL-EBI ENA sequence headers.
outputfiles:
convert-pass
reads passing header conversion.
convert-fail
raw reads failing header conversion.
outputannotationfields:
<format defined>
the annotation fields added are specific to the header format of the input file.