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edamclean - Validate and fix EDAM OBO ontology

Author

DebianMedPackagingTeam <debian-med-packaging@lists.alioth.debian.org>
           Wrote the script used to autogenerate this manual page.

Bugs

       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
       the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

Description

edamclean is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”).
       It is part of the "Ontology:EDAM" command group(s).

Name

       edamclean - Validate and fix EDAM OBO ontology

Options

Inputsection-edaminfileinfile
           Default value: /homes/jison/edam/EDAM.obo

       -taxdirectorydirectoryRequiredsection-modeselection
           Default value: Report only

   AdvancedsectionOutputsection-edamoutfileoutfile
           Default value: EDAM_out.obo

       -logfileoutfile
           Default value: EDAM_out.log

       -xmlfileoutfile
           Default value: EDAM_out.xml

       -xmloutdiroutdir

See Also

       edamclean is fully documented via the tfm(1) system.

Synopsis

edamclean-edaminfileinfile-taxdirectorydirectory-modeselection-edamoutfileoutfile-logfileoutfile-xmlfileoutfile-xmloutdiroutdiredamclean-help

See Also