extractseq - Extract regions from a sequence

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           Wrote the script used to autogenerate this manual page.

       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
       the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

       This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be
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EMBOSS 6.4.0                                       05/11/2012                                     EXTRACTSEQ(1e)

extractseq is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”).
       It is part of the "Edit" command group(s).

       extractseq - Extract regions from a sequence

Inputsection-sequencesequenceRequiredsection-regionsrange
           Regions to extract. A set of regions is specified by a set of pairs of positions. The positions are
           integers. They are separated by any non-digit, non-alpha character. Examples of region specifications
           are: 24-45, 56-78 1:45, 67=99;765..888 1,5,8,10,23,45,57,99 Default value:
           $(sequence.begin)-$(sequence.end)

   Additionalsection-separateboolean
           If this is set true then each specified region is written out as a separate sequence. The name of the
           sequence is created from the name of the original sequence with the start and end positions of the
           range appended with underscore characters between them, eg: XYZ region 2 to 34 is written as:
           XYZ_2_34 Default value: N

   Outputsection-outseqseqoutall

       extractseq is fully documented via the tfm(1) system.

extractseq-sequencesequence-regionsrange [-separateboolean] -outseqseqoutallextractseq-help