fastaexplod - split multi sequence FastA file into one file per sequence

       Written by German Tischler.

       Copyright    ©    2009-2016    German    Tischler.     License    GPLv3+:    GNU    GPL     version     3
       <http://gnu.org/licenses/gpl.html>
       This  is  free software: you are free to change and redistribute it.  There is NO WARRANTY, to the extent
       permitted by law.

BIOBAMBAM2                                        January 2016                                    FASTAEXPLOD(1)

       fastaexplod  reads a FastA file from standard input and writes the contained sequences to a set of files.
       It writes one sequence per output file. The file names used are fasta_<id>.fasta where id is a git  digit
       running  decimal number. The prefix (fasta_ by default) can be set using the -p switch. The .fasta suffix
       is omitted if the data only switch is given (see below). The program writes a two  column  table  to  the
       standard  output  channel.  The  first  column contains an output file name and the second the respective
       sequence id written to this file.

       The following options can be given

       -p<prefix>:    file    name    prefix.    The    files    will    be    called    <prefix>000000<suffix>,
       <prefix>000000<suffix><suffix>, etc. where <suffix> is .fasta unless the data only flag is set

       -d/--dataonly:  write only the base data but no header/prolog line. This sets the file name suffix to the
       empty string.

       -s/--singleline: write a single line of base data instead of breaking the base data into multiple lines

       -L/--longname: do not shorten read names by clipping of everything starting from first white space

       -l<num>: set the length of the base data lines (80 by default).

       -v/--version: print the version number and quit

       -h/--help: print a help message and quit

       fastaexplod - split multi sequence FastA file into one file per sequence

       Report bugs to <germant@miltenyibiotec.de>

fastaexplod [options]