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fastaq_to_random_subset - Make a random sample of sequences (and optionally mates as well)

Description

       usage: fastaq_to_random_subset [options] <infile> <outfile> <percent>

       Takes  a  random  subset of reads from a sequence file and optionally the corresponding read from a mates
       file. Output is interleaved if mates file given

   positionalarguments:
       infile Name of input file

       outfile
              Name of output file

       FLOAT  Per cent probability of keeping any given read (pair) in [0,100]

   options:-h, --help
              show this help message and exit

       --mate_file MATE_FILE
              Name of mates file

       --seed INT
              Seed for random number generator. If not given, python's default is used

fastaq_to_random_subset 3.17.0                    December 2024                       FASTAQ-TO_RANDOM_SUBSET(1)

Name

       fastaq_to_random_subset - Make a random sample of sequences (and optionally mates as well)

See Also