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fastautils - FASTA format file manipulation utilities

Author

       Guy St.C. Slater.  <guy@ebi.ac.uk>.

       See the AUTHORS file accompanying the source code for a list of contributors.

Availability

       This source code for the exonerate package is available  under  the  terms  of  the  GNU  general  public
       licence.

       Please     see    the    file    COPYING    which    was    distrubuted    with    this    package,    or
       http://www.gnu.org/licenses/gpl.txt for details.

       This package has been developed as part of the ensembl project.  Please see  http://www.ensembl.org/  for
       more information.

Description

       These  are  utilities  for the manipulation of FASTA format sequence databases which are distributed with
       the exonerate sequence alignment program.

Environment

       Not documented yet.

Examples

fastalengthsequence.fasta
              blah blah

Name

       fastautils - FASTA format file manipulation utilities

See Also

exonerate(1),e-PCR

fastautils                                         March 2003                                      fastautils(1)

Synopsis

fastachecksum[options]<inputfile>fastacleanfastaclipfastacompositionfastadifffastaexplodefastafetchfastahardmaskfastaindexfastalengthfastanrdbfastaoverlapfastareformatfastaremovefastarevcompfastasoftmaskfastasortfastasplitfastasubseqfastatranslatefastavalidcds

Version

       This documentation accompanies version 2.2.0 of the exonerate package.

See Also