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fetch_all_refseq_bacterial_genomes - visually comparing bacterial, plasmid, chloroplast, or mitochondrial

Author

       This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage
       of the program.

fetch_all_refseq_bacterial_genomes 20170919        August 2018             FETCH_ALL_REFSEQ_BACTERIAL_GENOMES(1)

Description

USAGE:
              fetch_all_refseq_bacterial_genomes -o DIR

   DESCRIPTION:
              Downloads all bacterial RefSeq sequences form NCBI in GenBank format.  The --min and --max options
              can be used to restrict the size of the returned sequences.

   REQUIREDARGUMENTS:-o, --output DIR

              The output directory to contain the downloaded GenBank files.

   OPTIONALARGUMENTS:-m, --min INTEGER

              Records with a sequence length shorter than this value will be ignored.

       -x, --max INTEGER

              Records with a sequence length longer than this value will be ignored.

       -h, --help

              Show this message.

   EXAMPLE:
              fetch_all_refseq_bacterial_genomes -o my_project/comparison_genomes

Name

       fetch_all_refseq_bacterial_genomes - visually comparing bacterial, plasmid, chloroplast, or mitochondrial
       sequences

See Also