genbank_get_genomes_by_taxon.py - genbank get genomes by taxon

        This manpage was written by Nilesh Patra for the Debian distribution and
        can be used for any other usage of the program.

genbank_get_genomes_by_taxon.py 0.2.11              July 2021                 GENBANK_GET_GENOMES_BY_TAXON.PY(1)

       usage: genbank_get_genomes_by_taxon.py [-h] -o OUTDIRNAME [-t TAXON] [-v] [-f]

       [--noclobber] [-l LOGFILE]
              [--format FORMAT] --email EMAIL [--retries RETRIES] [--batchsize BATCHSIZE] [--timeout TIMEOUT]

   optionalarguments:-h, --help
              show this help message and exit

       -o OUTDIRNAME, --outdir OUTDIRNAME
              Output directory (required)

       -t TAXON, --taxon TAXON
              NCBI taxonomy ID

       -v, --verbose
              Give verbose output

       -f, --force
              Force file overwriting

       --noclobber
              Don't nuke existing files

       -l LOGFILE, --logfile LOGFILE
              Logfile location

       --format FORMAT
              Output file format [gbk|fasta]

       --email EMAIL
              Email associated with NCBI queries (required)

       --retries RETRIES
              Number of Entrez retry attempts per request.

       --batchsize BATCHSIZE
              Entrez record return batch size

       --timeout TIMEOUT
              Timeout for URL connection (s)

       genbank_get_genomes_by_taxon.py - genbank get genomes by taxon