getCounts.py - generate read counts for each input file

              This  program  reads  supplied  .thetaMeans files and using either information from .prob files or
              Nmap option generates read counts for each input file provided.

       getCounts.py - generate read counts for each input file

-h, --help
              show this help message and exit

       -o OUT, --outFile=OUT
              Output file

       -v, --verbose
              Verbose output

       -p PROBDIR, --probDir=PROBDIR
              Directory with .prob files. The program will look in here for files  with  same  name  except  fot
              extension .prob in order to find out total-aligned-read counts for each experiment.

       -n NMAP, --Nmap=NMAP
              Comma separated list of total aligned-read-counts for each experiment.

getCounts.py 0.7.5+dfsg                          September 2021                                  GETCOUNTS.PY(1)

getCounts.py [options] [<inputFile.thetaMeans>]+