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go-export-graph.pl - exports a graph

Arguments

       after the file name you can optionally specify query constraint pairs; eg

        acc GO:0007610
        name 'cysteine biosynthesis'

Description

       exports a graph as an indented ascii tree, PNG or OBO file

Name

       go-export-graph.pl - exports a graph

Options

-wEXPORT_FORMAT

       one of text, obo or png-use_cache
       If this switch is specified, then caching mode is turned on.

       With caching mode, the first time you parse a file, then an additional file will be exported in a special
       format that is fast to parse. This file will have the same filename as the original file, except it will
       have the ".cache" suffix.

       The next time you parse the file, this program will automatically check for the existence of the ".cache"
       file. If it exists, and is more recent than the file you specified, this is parsed instead. If it does
       not exist, it is rebuilt.

   DOCUMENTATION
       <http://www.godatabase.org/dev>

   SEEALSO
       go2fmt.pl

perl v5.36.0                                       2023-12-18                                GO-EXPORT-GRAPH(1p)

Synopsis

         go-export-graph.pl -w png ontology/gene_ontology.obo | display -

         go-export-graph.pl ontology/gene_ontology.obo 'acc' GO:0007610

         go-export-graph.pl ontology/so.obo 'name' 'protein'

See Also