graphlan_annotate - GraPhlAn annotate module

       The software was written by Nicola Segata <nsegata@hsph.harvard.edu>

       This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage
       of the program.

graphlan_annotate 1.1                               June 2016                               GRAPHLAN_ANNOTATE(1)

       GraPhlAn  is  a  software  tool  for  producing  high-quality  circular  representations of taxonomic and
       phylogenetic  trees.  It  focuses   on   concise,   integrative,   informative,   and   publication-ready
       representations of phylogenetically- and taxonomically-driven investigation.

       graphlan_annotate is the annotate module of graphlan(1).

       graphlan_annotate - GraPhlAn annotate module

positionalarguments:
       input_tree
              the input tree in Newick, Nexus, PhyloXML or plain text format

       output_tree
              the  output  tree in PhyloXML format containing the newly added annotations. If not specified, the
              input tree file will be overwritten

   optionalarguments:-h, --help
              show this help message and exit

       --annot annotation_file
              specify the annotation file

       -v, --version
              Prints the current GraPhlAn version and exit

graphlan(1)

graphlan_annotate [-h] [--annot annotation_file] [-v] input_tree [output_tree]