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gt-encseq-check - Check the consistency of an encoded sequence file.

Description

-scantrials [value]
           specify number of scan trials (default: 0)

       -multicharcmptrials [value]
           specify number of multicharacter trials (default: 0)

       -prefixlength [value]
           prefix length (default: 0)

       -nocheckunit [yes|no]
           do not run checkextractunitatpos (default: no)

       -mirrored [yes|no]
           use mirrored encseq (default: no)

       -v [yes|no]
           be verbose (default: no)

       -help
           display help and exit

       -version
           display version information and exit

Name

       gt-encseq-check - Check the consistency of an encoded sequence file.

Reporting Bugs

       Report bugs to https://github.com/genometools/genometools/issues.

GenomeTools 1.6.5                                  04/27/2024                                 GT-ENCSEQ-CHECK(1)

Synopsis

gtencseqcheck [option ...] [file]

See Also