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gt-encseq-info - Display meta-information about an encoded sequence.

Description

-nomap [yes|no]
           do not map encoded sequence (gives less information) (default: no)

       -mirrored [yes|no]
           use mirrored encoded sequence (DNA only) (default: no)

       -noindexname [yes|no]
           do not output index name (default: no)

       -show_alphabet [yes|no]
           output alphabet definition (default: no)

       -n50 [yes|no]
           show N50 values (minimum length of largest sequences for covering at least 50% of total sequence
           length) (default: no)

       -o [filename]
           redirect output to specified file (default: undefined)

       -gzip [yes|no]
           write gzip compressed output file (default: no)

       -bzip2 [yes|no]
           write bzip2 compressed output file (default: no)

       -force [yes|no]
           force writing to output file (default: no)

       -help
           display help and exit

       -version
           display version information and exit

Name

       gt-encseq-info - Display meta-information about an encoded sequence.

Reporting Bugs

       Report bugs to https://github.com/genometools/genometools/issues.

GenomeTools 1.6.5                                  04/27/2024                                  GT-ENCSEQ-INFO(1)

Synopsis

gtencseqinfo [option ...] indexname

See Also