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gt-encseq2spm - Compute suffix prefix matches from encoded sequence.

Description

-l [value]
           specify the minimum length (default: 0)

       -parts [value]
           specify the number of parts (default: 0)

       -memlimit [string]
           specify maximal amount of memory to be used during index construction (in bytes, the keywords MB and
           GB are allowed) (default: undefined)

       -singlestrand [yes|no]
           use only the forward strand of the sequence (default: no)

       -spm [string]
           specify output for spms (default: undefined)

       -ii [string]
           specify the input sequence (default: undefined)

       -v [yes|no]
           be verbose (default: no)

       -help
           display help and exit

       -version
           display version information and exit

Name

       gt-encseq2spm - Compute suffix prefix matches from encoded sequence.

Reporting Bugs

       Report bugs to https://github.com/genometools/genometools/issues.

GenomeTools 1.6.5                                  04/27/2024                                   GT-ENCSEQ2SPM(1)

Synopsis

gtencseq2spm [option ...] [file]

See Also