gthbssmbuild - build splice site model
Contents
Description
Build a BSSM file from a directory tree containing the training data.
Name
gthbssmbuild - build splice site model
Options
-bssmfile
specify name of BSSM file to store parameters in default: undefined
-datapath
specify root of species-specific training data directory tree default: undefined
-gtdonor
train GT donor model default: no
-gcdonor
train GC donor model default: no
-agacceptor
train AG acceptor model default: no
-gzip
use gzip’ed input files default: no
-help
display help and exit
-version
display version information and exit
GTHBSSMBUILD(1)
Synopsis
gthbssmbuild [option ...] genomic_file cDNA_file
