hilive-build - Index creation tool for HiLive - Realtime Alignment of Illumina Reads

       This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage
       of the program.

hilive-build 2.0a                                 October 2019                                   HILIVE-BUILD(1)

       hilive-build --input hg19.fa --out-prefix ./index/hg19

       hilive-build - Index creation tool for HiLive - Realtime Alignment of Illumina Reads

GENERALOPTIONS:-h [ --help ]
              Print this help message and exit

       -l [ --license ]
              Print licensing information and exit

   REQUIREDOPTIONS:-i [ --input ] arg
              Reference genome(s) in (multi-)FASTA format.  [REQUIRED]

       -o [ --out-prefix ] arg
              Output file prefix. Several files with the same prefix will be created. [REQUIRED]

   OTHEROPTIONS:--do-not-convert-spaces
              Do not convert all spaces in reference ids to underscores [Default: converting is on]

       --trim-after-space
              Trim all reference ids after first space [Default: false]

hilive-build [options]