hmm2index - create a binary SSI index for an HMM database

       Sean Eddy
       HHMI/Dept. of Genetics
       Washington Univ. School of Medicine
       4566 Scott Ave.
       St Louis, MO 63110 USA
       http://www.genetics.wustl.edu/eddy/

HMMER 2.3.2                                         Oct 2003                                        hmm2index(1)

       Copyright (C) 1992-2003 HHMI/Washington University School of Medicine.
       Freely distributed under the GNU General Public License (GPL).
       See the file COPYING in your distribution for details on redistribution conditions.

hmm2index  is  a  utility  that  creates  a  binary  SSI ("squid sequence index" format) index for an HMM
       database file called database.  The new index file is named database.ssi.  An SSI index file is  required
       for hmm2fetch to work, and also for the PVM implementation of hmm2pfam.

       hmm2index - create a binary SSI index for an HMM database

-h     Print brief help; includes version number and summary of all options, including expert options.

       Master man page, with full list of and guide to the individual man pages: see hmmer2(1).

       For           complete           documentation,           see           the           user          guide
       (ftp://selab.janelia.org/pub/software/hmmer/2.3.2/Userguide.pdf);   or   see   the   HMMER   web    page,
       http://hmmer.janelia.org/.

hmm2index[options]database